OLAPH: Improving Factuality in Biomedical Long-form Question Answering
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Sep 10, 2024 - Python
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biomedical-research
Here are 31 public repositories matching this topic...
Chinese Mammography Database (CMMD dataset) Deep Learning Classification Pipeline
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Mar 15, 2022 - Jupyter Notebook
Website for the JuliaHealth organization (powered by Franklin.jl).
medicine julia julia-language health biomedical-informatics healthcare public-health health-care electronic-health-records julia-programming-language health-informatics franklin computational-health biomedical-research digital-health clinical-informatics health-information-technology juliahealth juliamedicine juliamedical
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May 16, 2025 - Julia
Accelerate common Petri dish assays with AI.
swift machine-learning computer-vision artificial-intelligence ios-app object-detection microbiology phage plaque biomedical-research yolov5 petri-dish
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Oct 28, 2025 - Swift
curated links and customized materials to support biomedical researchers in implementing open science approaches
training open-source computational-biology open-science reproducibility biomedical-research reproducible-computational-methods
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Dec 17, 2025 - JavaScript
A resource for biomedical students and researchers. Includes proteomics software tools like FragPipe, MaxQuant, PDV, SearchGUI, ThermoRawFileParser, and PeptideShaker. Offers a user-friendly interface, automated identification and quantification, comprehensive data analysis, and lightweight clone feature for optimized storage.
computational-biology data-visualization data-analysis proteomics dataset-management biomedical-research proteomics-data-analysis user-friendly-interface clinical-proteomics proteomics-software lightweight-cloning
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Oct 15, 2025 - Jupyter Notebook
Repository containing trained YOLOv5 object detection models used within OnePetri for Petri dish and plaque detection.
machine-learning computer-vision artificial-intelligence object-detection microbiology phage plaque biomedical-research yolov5 petri-dish
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Oct 28, 2025
Biomedical knowledge graph builder.
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Sep 7, 2025 - Jupyter Notebook
Collaboratively written manuscript discussing Ten Simple Rules for Enabling Open Science in Biomedical Research
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Jul 25, 2019 - HTML
My assignments and projects concerned with Biomedical Engineering
biomedical-informatics software-engineering biomedical-image-processing biomedical-engineering biomedical-data-science biomedical-image-analysis biomedical-research
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Aug 9, 2024 - TeX
B.Sc. Thesis Deep Learning & NLP research on Medical Image Captioning
nlp machine-learning deep-learning transformers cnn pytorch nltk neural-networks biomedical-image-processing keras-tensorflow publication-repository bert-models machine-learning-research biomedical-research sota-model
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Feb 3, 2024 - Python
suggestions to practice machine learning for biomedical applications
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May 4, 2021
This research project is part of a PhD by Lee Jones and will examine statistical quality in health and biomedical research by focusing on linear regression models. The goal of this study is to explore current statistical practice and identify common statistical misconceptions and errors made by researchers. We expect our results will highlight t…
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Jun 8, 2024
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Apr 11, 2022 - JavaScript
This is a repository of template files to store metadata of laboratory experiments.
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Nov 21, 2022
Unofficial Python wrapper for the NCBI LitSense API
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Sep 6, 2023 - Python
This repository provides a practical, data-centric AI/ML module for biomedical researchers. It covers R programming, data preparation, model building, and AI/ML applications using AWS SageMaker and Jupyter notebooks.
python aws machine-learning ai deep-learning tensorflow keras artificial-intelligence feature-engineering model-interpretation sagemaker responsible-ai biomedical-research data-centric-ai model-building-and-evaluation fair-data-principles
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Jun 4, 2025 - Jupyter Notebook
Repository of excel templates of routine tasks performed in the laboratory
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Nov 21, 2022
This repository constains all the required documentation, liscensing, Source Code and APIs of reprCheck (NLP based Biomedical Research Checklist). This application is made by hypertuning the pre-trained transformer models.
api docker natural-language-processing biomedical natural-language-understanding science-research biomedical-research
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Dec 5, 2025 - Python
🧬 AI-powered biomedical research platform built with LangGraph, Groq, and React 19. Features 5 specialized agents, real-time streaming, and Model Context Protocol (MCP) integration.
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Dec 17, 2025 - TypeScript
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