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Remove external tests and deprecate sc.external

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Remove external tests and deprecate sc.external #3645

Remove external tests and deprecate sc.external
743d439
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Codecov / codecov/project failed May 26, 2025 in 1s

73.59% (target 75.00%)

View this Pull Request on Codecov

73.59% (target 75.00%)

Details

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 73.59%. Comparing base (eb8974a) to head (743d439).

✅ All tests successful. No failed tests found.

❌ Your project check has failed because the head coverage (73.59%) is below the target coverage (75.00%). You can increase the head coverage or adjust the target coverage.

Additional details and impacted files
@@            Coverage Diff             @@
##             main    #3645      +/-   ##
==========================================
- Coverage   76.74%   73.59%   -3.15%     
==========================================
  Files         113      113              
  Lines       12709    12712       +3     
==========================================
- Hits         9754     9356     -398     
- Misses       2955     3356     +401     
Files with missing lines Coverage Δ
src/scanpy/external/__init__.py 100.00% <100.00%> (ø)

... and 24 files with indirect coverage changes