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pha4ge / hAMRonization Public

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Fork 34
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Remove standalone PointFinder support #98

Merged

fmaguire merged 14 commits intopha4ge:masterpha4ge/hAMRonization:masterfrom

zwets:point-to-resfinderzwets/hAMRonization:point-to-resfinderCopy head branch name to clipboard

Jan 3, 2025

Conversation Commits14 (14)Checks Files changed

Merged

Remove standalone PointFinder support #98
fmaguire merged 14 commits intopha4ge:masterfrom
zwets:point-to-resfinder

Commits

Commits on Dec 28, 2024

Upgrade AMRFinderPlus hamronizer to 4.0.3
zwets
committed
AmrFinderPlus: nuc/prot detection is more subtle
zwets
committed
Minor formatting fix to match project style
zwets
committed
AmrFinderPlus upgrade: update tests
zwets
committed

Commits on Dec 30, 2024

Formatting fix
zwets
committed
ResFinder: fix error when coverage absent
zwets
committed
ResFinder: leave coverage ratio alone
zwets
committed
ResFinder: fix variant phenotype collection
zwets
committed
ResFinder: pick correct database
zwets
committed
ResFinder: fix failing test
zwets
committed
Minor fixes in tests
zwets
committed
Make pointfinder share resfinder's parser
zwets
committed
Remove standalone PointFinder hamronizer altogether
zwets
committed
Remove pointfinder tests
zwets
committed

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