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    30 repositories

    • Pontine7T

      Public
      Codes for data analysis of Pontine project
      Jupyter Notebook
      •1•0•0•0•Updated Jan 26, 2026Jan 26, 2026

    • MultiTaskBattery

      Public
      Python
      •
      MIT License
      •5•4•0•0•Updated Jan 26, 2026Jan 26, 2026

    • Functional_Fusion

      Public
      Fusion framework for management of functional imaging datasets
      Jupyter Notebook
      •2•13•0•1•Updated Jan 25, 2026Jan 25, 2026

    • robotcode

      Public
      C
      •0•3•0•0•Updated Jan 23, 2026Jan 23, 2026

    • nitools

      Public
      Basic Neuroimaging functions - stuff missing from nibabel and nilearn
      Python
      •
      MIT License
      •2•14•0•1•Updated Jan 22, 2026Jan 22, 2026

    • AnatSearchlight

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated Jan 20, 2026Jan 20, 2026

    • diedrichsenlab.github.io

      Public
      SCSS
      •0•1•1•0•Updated Dec 31, 2025Dec 31, 2025

    • PcmPy

      Public
      PCM toolbox - implementation in Python
      Jupyter Notebook
      •
      Other
      •1•14•0•0•Updated Dec 31, 2025Dec 31, 2025

    • cortico_cereb_connectivity

      Public
      Cortico cerebellar connectivity models from the Diedrichsenlab
      Jupyter Notebook
      •
      MIT License
      •1•1•0•0•Updated Dec 25, 2025Dec 25, 2025

    • SUITPy

      Public
      Jupyter Notebook
      •
      Other
      •9•26•1•0•Updated Dec 23, 2025Dec 23, 2025

    • HierarchBayesParcel

      Public
      Jupyter Notebook
      •
      MIT License
      •3•5•0•0•Updated Nov 14, 2025Nov 14, 2025

    • cerebellar_atlases

      Public
      Python
      •16•46•2•0•Updated Oct 26, 2025Oct 26, 2025

    • DCBC

      Public
      Python
      •
      MIT License
      •5•12•3•1•Updated Oct 24, 2025Oct 24, 2025

    • ProbabilisticParcellation

      Public
      Cerebellar Probabilistic Parcellation project using generativeMRF and FunctionalFusion
      Jupyter Notebook
      •1•2•0•0•Updated Oct 17, 2025Oct 17, 2025

    • spmdefs

      Public
      Call-able API for SPM12 deformations - extracted from job-manager code for convenience
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Sep 22, 2025Sep 22, 2025

    • VariancePartitioning

      Public
      A set of didactic Jupyter notebook explaining the concept of variance partitioning in linear models
      Jupyter Notebook
      •
      MIT License
      •1•2•0•0•Updated Sep 10, 2025Sep 10, 2025

    • BrainDataScienceBlog

      Public
      Code and Sources for the Diedrichsenlab blog
      TeX
      •2•4•0•1•Updated Sep 10, 2025Sep 10, 2025

    • FusionModel

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated Jun 24, 2025Jun 24, 2025

    • selective_recruitment

      Public
      Jupyter Notebook
      •
      MIT License
      •1•0•0•0•Updated May 9, 2025May 9, 2025

    • spmj_tools

      Public
      Tools to run SPM12 jobs
      MATLAB
      •
      MIT License
      •1•1•0•0•Updated Apr 4, 2025Apr 4, 2025

    • dataframe

      Public
      An implementation of Dataframes that should have been part of Matlab from the beginning
      MATLAB
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Nov 13, 2024Nov 13, 2024

    • region

      Public
      Toolbox for ROI analyses for fMRI data
      MATLAB
      •0•0•0•0•Updated Sep 26, 2024Sep 26, 2024

    • surfAnalysis

      Public
      Analysis functions for surface-based analyses, using freesurfer and connectome workbench
      MATLAB
      •5•15•1•0•Updated Apr 19, 2024Apr 19, 2024

    • SUITPapaya

      Public
      A pure JavaScript medical research image viewer.
      JavaScript
      •
      Other
      •209•1•1•0•Updated Jan 31, 2024Jan 31, 2024

    • surfAnalysisPy

      Public
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •4•4•0•0•Updated Dec 26, 2023Dec 26, 2023

    • SequenceLearningModel

      Public
      Modelling of Sequence production and learning
      Jupyter Notebook
      •1•4•0•0•Updated Nov 29, 2023Nov 29, 2023

    • fs_LR_32

      Public
      Standard human cortical surface-based template for neuroimaging analyses (Freesurfer, left-right-symmetric, ~32k vertices) v
      Ruby
      •7•54•1•0•Updated Sep 26, 2023Sep 26, 2023

    • Cerebellum_mdtb

      Public
      includes cases I used to analyze MDTB dataset
      MATLAB
      •0•0•0•1•Updated Jun 22, 2022Jun 22, 2022

    • smarts_restingstate

      Public
      Analysis of resting state data for the SMARTS project
      MATLAB
      •1•1•0•0•Updated Nov 26, 2021Nov 26, 2021

    • distRDM

      Public
      MATLAB
      •0•0•0•0•Updated May 31, 2017May 31, 2017