Repositories list

• multistain_cyclegan_normalization

  Public
  Implementation of MultiStain-CycleGAN

  normalizationcyclegan-pytorchstain+ 1histopathology-image-analysis

  Python

  •

  Other

  •0•10•0•0•Updated Jan 8, 2026Jan 8, 2026

• expert_informed_derma_classification

  Public
  Jupyter Notebook

  •

  MIT License

  •0•0•0•0•Updated Oct 22, 2025Oct 22, 2025

• expert_informed_histo_classification

  Public
  Python

  •

  MIT License

  •0•0•0•0•Updated Oct 22, 2025Oct 22, 2025

• UroBot

  Public
  Urology-informed Large Language Model

  Python

  •

  MIT License

  •3•4•1•0•Updated Aug 21, 2025Aug 21, 2025

• Derma-XAI

  Public
  Jupyter Notebook

  •1•0•0•0•Updated Aug 11, 2025Aug 11, 2025

• GleasonXAI

  Public
  Explainable Gleason pattern prediction.

  Jupyter Notebook

  •

  MIT License

  •3•7•1•1•Updated Jun 10, 2025Jun 10, 2025

• EyeTracking

  Public
  Jupyter Notebook

  •0•0•0•0•Updated Mar 19, 2025Mar 19, 2025

• wsi_preprocessing

  Public
  Python script to do tiling and basic filtering of histological slides

  Python

  •3•9•3•0•Updated Feb 27, 2024Feb 27, 2024

• slide_tools

  Public
  A collection of useful tools to handle WSIs

  Jupyter Notebook

  •1•2•5•0•Updated Jan 19, 2024Jan 19, 2024

• ssl-wsi

  Public
  Self-supervised learning on WSI

  Python

  •

  MIT License

  •0•1•0•0•Updated Jan 19, 2024Jan 19, 2024

• ovar-hrd

  Public
  Python

  •0•1•0•0•Updated Dec 20, 2023Dec 20, 2023

• wsi_preprocessing-crc

  Public
  Python script to do tiling and basic filtering of histological slides

  Python

  •3•0•2•0•Updated Dec 13, 2023Dec 13, 2023

• wsi-calib

  Public
  Evaluating calibration for WSI classification

  Python

  •0•0•0•0•Updated Dec 1, 2023Dec 1, 2023

• uncertainty-benchmark

  Public
  Jupyter Notebook

  •1•5•3•0•Updated Nov 15, 2023Nov 15, 2023

• CRC_DL_Survival_Curves

  Public
  Python

  •1•1•0•0•Updated Jul 28, 2023Jul 28, 2023

• 3d-histo

  Public
  Scripts for 3d reconstruction from histological slices

  Python

  •0•3•0•0•Updated Jul 17, 2023Jul 17, 2023

• CRC_Outcome

  Public
  0•0•0•0•Updated Jun 29, 2023Jun 29, 2023

• niivue-ui-fork

  Public
  The React Material UI interface for NiiVue

  JavaScript

  •

  BSD 2-Clause "Simplified" License

  •10•0•0•0•Updated Jun 21, 2023Jun 21, 2023

• federated_histo

  Public
  Python

  •0•0•0•0•Updated May 11, 2023May 11, 2023

• fl_jama

  Public
  Python

  •0•0•0•0•Updated May 9, 2023May 9, 2023

• SCP-CytoBrowser

  Public
  CytoBrowser, a JavaScript and Node.js driven environment for fast and accessible collaborative online visualization, assessment, and annotation of very large mi…

  JavaScript

  •

  GNU General Public License v3.0

  •9•0•0•0•Updated Nov 22, 2022Nov 22, 2022

• SCP-Code

  Public
  General code used throughout the SCP project

  Jupyter Notebook

  •

  Apache License 2.0

  •0•1•0•0•Updated Apr 5, 2022Apr 5, 2022

• PEAIP

  Public
  Everything related to the PEAIP project

  JavaScript

  •1•1•0•0•Updated Feb 28, 2022Feb 28, 2022

• crc-lnm

  Public
  Prediction of lymph node status from routine histological slides of colorectal cancer using deep learning

  Python

  •1•1•0•0•Updated Oct 18, 2021Oct 18, 2021

• SCP-Robustness-Benchmark

  Public
  A Benchmark for Convolutional Neural Network Robustness in Skin Cancer Classification

  Jupyter Notebook

  •0•3•0•0•Updated Aug 5, 2021Aug 5, 2021

• PatientDataIntegration

  Public
  Jupyter Notebook

  •1•4•0•0•Updated Feb 10, 2021Feb 10, 2021