refactoring to prepare for stackcore

README.md

@@ -50,16 +50,16 @@ determinstic tool.
 `napi` aims to support all major programming languages. Here is the current
 status:
 
-| Language/Framework | Status         | Related Issues                                      |
-| ------------------ | -------------- | --------------------------------------------------- |
-| Python             | ✅ Supported   | [#28](https://github.com/nanoapi-io/napi/issues/28) |
-| C#                 | ✅ Supported   | [#31](https://github.com/nanoapi-io/napi/issues/31) |
-| PHP                | 🚧 In Progress | [#30](https://github.com/nanoapi-io/napi/issues/30) |
-| Java               | 🚧 In Progress | [#32](https://github.com/nanoapi-io/napi/issues/32) |
-| C                  | 🚧 In Progress | Not Tracked Yet                                     |
-| C++                | 🚧 In Progress | Not Tracked Yet                                     |
-| JavaScript         | 🚧 In Progress | Not Tracked Yet                                     |
-| TypeScript         | 🚧 In Progress | Not Tracked Yet                                     |
+| Language/Framework | Status         |
+| ------------------ | -------------- |
+| Python             | ✅ Supported   |
+| C#                 | ✅ Supported   |
+| C                  | ✅ In Progress |
+| Java               | 🚧 In Progress |
+| C++                | 🚧 In Progress |
+| PHP                | 🚧 In Progress |
+| JavaScript         | 🚧 In Progress |
+| TypeScript         | 🚧 In Progress |
 
 For the latest updates, visit our [project board](/projects).
 
@@ -104,17 +104,30 @@ Initialize the project. This step is required before running any other command.
 This will create a .napirc configuration file in the project root, storing paths
 and settings necessary for further commands.
 
-### `napi audit view`
+### `napi manifest generate`
 
-Scan and audit your codebase for potential improvements, vulnerabilities, and
-maintainability issues. This command opens the NanoAPI UI in your default
-browser, providing a clear overview of what areas of your code would benefit
-most from refactoring or cleanup.
+Generate a manifest of your codebase that captures its structure, dependencies,
+and relationships. This command analyzes your code and writes the manifest data
+to the configured `napi_out` directory in your project.
 
-> **Important**: Run napi audit view periodically, especially before major
-> refactoring efforts, to ensure your code is in good shape. It will soon also
-> be possible to integrate that command into CI/CD workflows to catch
-> architectural-level-quality issues early.
+### `napi manifest view`
+
+Open the NanoAPI UI in your default browser to visualize and explore the
+manifest generated by `napi manifest generate`. This provides an interactive
+view of your codebase's architecture, helping you identify areas for potential
+improvements and refactoring.
+
+### `napi extract`
+
+Extract specific symbols (functions, classes, etc.) from your codebase into
+separate files. Use the format `--symbol file|symbol` where file is the path
+relative to your project root and symbol is the name to extract. The UI can
+generate these commands for convenient copy-pasting when browsing your code.
+
+> **Important**: Run `napi manifest generate` whenever you make significant
+> changes to your codebase to ensure your manifest stays up-to-date. The
+> manifest data can be integrated into CI/CD workflows to track architectural
+> changes over time.
 
 ## CI/CD Integration