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  1. MSRMD-CGMM MSRMD-CGMM Public

    This comprises the essential input files and scripts necessary for conducting constrained density functional theory (CDFT)-based fitting, as well as Multiscale Reactive Molecular Dynamics/Coarse-Gr…

    Python 1 2

  2. Equivariant-NNPs-for-bulk-water Equivariant-NNPs-for-bulk-water Public

    Final project - Structural and dynamical properties of liquid water using neural network potentials

    Python

  3. Variational-Autoencoder Variational-Autoencoder Public

    Implementation of variational autoencoders (VAEs) for generating a large dataset of molecular structures along a reaction coordinate, given a small training dataset.

    Python

  4. CG-in-OpenMM CG-in-OpenMM Public

    Implementation of CG potentials in OpenMM

    Jupyter Notebook 1

  5. Spatial-correlation-functions Spatial-correlation-functions Public

    Codes for computing the radial and angular distribution functions in statistical mechanics.

    Fortran

  6. deepmodeling/deepmd-kit deepmodeling/deepmd-kit Public

    A deep learning package for many-body potential energy representation and molecular dynamics

    Python 1.8k 583