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Funny sample names in the output files of 18S and 16S - Swarm (v2.1.5)

enhancementNew feature or requestNew feature or request

Status: Open.

#72 In hariszaf/pema;

· cpavloud opened on Jan 14, 2025

Discrepancy in output file when vsearch is chosen instead of swarm

enhancementNew feature or requestNew feature or request

Status: Open.

#71 In hariszaf/pema;

· cpavloud opened on Jan 14, 2025

ITS in v2.1.5 version

bugSomething isn't workingSomething isn't working

Status: Open.

#70 In hariszaf/pema;

· cpavloud opened on Jan 14, 2025

Wrong sample names in OutputPerSample

bugSomething isn't workingSomething isn't working

Status: Open.

#69 In hariszaf/pema;

· JustinePa opened on Jun 26, 2024

Storage usage of PEMA

Status: Open.

#65 In hariszaf/pema;

· savvas-paragkamian opened on Dec 25, 2023

When Swarm is chosen for the ITS, the names of the sequences are OtuXX and not ASVXX

Status: Open.

#61 In hariszaf/pema;

· cpavloud opened on Nov 10, 2023

16s copy number

enhancementNew feature or requestNew feature or request

Status: Open.

#60 In hariszaf/pema;

· hariszaf opened on Oct 31, 2023

MIDORI updates

enhancementNew feature or requestNew feature or request

LW mid prioritypriority for the LW developerspriority for the LW developers

updateupdate a resource used in pema to a more recent versionupdate a resource used in pema to a more recent version

Status: Open.

#56 In hariszaf/pema;

· kmexter opened on Jun 8, 2023

PEMA to create a run summary file

FAIR improvement

LW high prioritypriority for the LW developerspriority for the LW developers

Status: Open.

#55 In hariszaf/pema;

· kmexter opened on Jun 8, 2023

PEMA Ro-Crate

enhancementNew feature or requestNew feature or request

FAIR improvement

LW high prioritypriority for the LW developerspriority for the LW developers

provenanceMetadata provenanceMetadata provenance

Status: Open.

#54 In hariszaf/pema;

· kmexter opened on Jun 8, 2023

extended final table

enhancementNew feature or requestNew feature or request

LW high prioritypriority for the LW developerspriority for the LW developers

Status: Open.

#53 In hariszaf/pema;

· kmexter opened on May 30, 2023

provide pema main data product in a 7-level taxonomy format

enhancementNew feature or requestNew feature or request

FAIR improvement

LW mid prioritypriority for the LW developerspriority for the LW developers

Status: Open.

#52 In hariszaf/pema;

· hariszaf opened on Apr 17, 2023