Clinical Trial Data Extraction

This project provides a script for extracting clinical trial data from abstracts using OpenAI's API.

Setup

1. Clone the repository.
2. Install required libraries:

   pip install openai pandas

3. Set up your OpenAI API key in the script.

Usage

1. Place your abstracts in a text file and set the file path in the script.
2. Run the script:

   python your_script.py

3. The extracted data will be saved in the specified output folder.

Customization

• Modify general_instruction, query_study_info, query_outcomes_info1, and other query variables to customize the extraction process.
• Detailed prompts can be provided upon request.

License

IMO License