Code and summary results for "Best practices for normalization of Nanostring nCounter gene expression cohorts"
Included:
- nanostring_RUV_functions.R - R code for the functions used in normalization, quality control, and post-normalization visualization
- sabry_analysis.R - R code for analysis of Sabry et al, 2019 dataset. The raw data can be found here
- Click here for an easy to follow tutorial on nCounter normalization with RUVSeq
- These functions have been bundled into an R package. Click here to access the Github repository for NanoNormIter.