Add configurable skills and MCP system

agents/claude-subagents/accessibility-auditor.md

@@ -27,8 +27,8 @@ Approach:
 - Motion: respect prefers-reduced-motion; provide pause controls for animations.
 
 Must‑read at startup:
-- the [compact MCP list](../reference/tools-guide.md) (Tier 1: tool selection)
-- the [handoff guidelines](../reference/handoff-guide.md)
+- the [compact MCP list](../../protocols/context/static/tools-guide.md) (Tier 1: tool selection)
+- the [handoff guidelines](../../protocols/context/static/handoff-guide.md)
 
 Output format:
 - Audit report: issues by WCAG criterion, severity, affected elements.

agents/claude-subagents/ai-ml-eng.md

@@ -24,10 +24,8 @@ Approach:
 - Prepare safe diffs and a staged rollout; validate on representative data.
 
 Must-read at startup:
-- the [compact MCP list](../reference/tools-guide.md) (Tier 1)
-- the [code search guide](../reference/by-category/code-search.md) (Tier 2)
-- the [Sourcegraph deep dive](../reference/deep-dives/sourcegraph.md) (Tier 3)
-- the [handoff guidelines](../reference/handoff-guide.md)
+- the [compact MCP list](../../protocols/context/static/tools-guide.md) (Tier 1)
+- the [handoff guidelines](../../protocols/context/static/handoff-guide.md)
 
 Output format:
 - Findings: risks, hotspots, and evidence (paths:lines) with short rationale.

agents/claude-subagents/api-client-designer.md

@@ -29,10 +29,8 @@ Approach:
 - Request coalescing: batch APIs, deduplication windows, streaming for high volume.
 
 Must‑read at startup:
-- the [compact MCP list](../reference/tools-guide.md) (Tier 1: tool selection)
-- the [documentation category guide](../reference/by-category/documentation.md) (Tier 2)
-- the [Context7 deep dive](../reference/deep-dives/context7.md) (Tier 3 as needed)
-- the [handoff guidelines](../reference/handoff-guide.md)
+- the [compact MCP list](../../protocols/context/static/tools-guide.md) (Tier 1: tool selection)
+- the [handoff guidelines](../../protocols/context/static/handoff-guide.md)
 
 Output format:
 - SDK design: initialization, auth, client lifecycle, resource cleanup.

agents/claude-subagents/api-integration.md

@@ -26,12 +26,9 @@ Approach:
 - Set per-endpoint SLOs and error taxonomy; add schema-change alerts and observability hooks.
 
 Must-read at startup:
-- the [compact MCP list](../reference/tools-guide.md) (Tier 1: quick tool selection)
-- the [documentation guide](../reference/by-category/documentation.md) (Tier 2: Context7 vs alternatives; versioned docs)
-- the [Context7 deep dive](../reference/deep-dives/context7.md) (Tier 3: official framework/library docs)
-- the [Semgrep deep dive](../reference/deep-dives/semgrep.md) (security/hygiene checks for APIs)
-- the [docs style guide](../reference/style-guides/docs-style-guide.md) (structure and formatting for deliverables)
-- the [handoff guidelines](../reference/handoff-guide.md)
+- the [compact MCP list](../../protocols/context/static/tools-guide.md) (Tier 1: quick tool selection)
+- the [docs style guide](../../protocols/context/static/style-guides/docs-style-guide.md) (structure and formatting for deliverables)
+- the [handoff guidelines](../../protocols/context/static/handoff-guide.md)
 
 Output format:
 - Charter: goals, boundaries, protocol decision and trade-offs.

agents/claude-subagents/api-mocking-specialist.md

@@ -27,8 +27,8 @@ Approach:
 - Record/replay: capture real responses for realistic mocking.
 
 Must‑read at startup:
-- the [compact MCP list](../reference/tools-guide.md) (Tier 1: tool selection)
-- the [handoff guidelines](../reference/handoff-guide.md)
+- the [compact MCP list](../../protocols/context/static/tools-guide.md) (Tier 1: tool selection)
+- the [handoff guidelines](../../protocols/context/static/handoff-guide.md)
 
 Output format:
 - Mock implementation: MSW handlers, WireMock mappings, Pact contracts.

agents/claude-subagents/architect.md

@@ -25,9 +25,8 @@ Approach:
 - Specify artifacts (ADRs/diagrams/SLO sketches) and enable a walking skeleton.
 
 Must‑read at startup:
-- the [compact MCP list](../reference/tools-guide.md) (Tier 1: tool selection)
-- the [code search guide](../reference/by-category/code-search.md) (Tier 2)
-- the [handoff guidelines](../reference/handoff-guide.md)
+- the [compact MCP list](../../protocols/context/static/tools-guide.md) (Tier 1: tool selection)
+- the [handoff guidelines](../../protocols/context/static/handoff-guide.md)
 
 Output format:
 - Decision brief: objectives, constraints, options, trade‑offs, chosen path, revisit triggers; evidence links.

agents/claude-subagents/architecture-audit.md

@@ -19,9 +19,8 @@ When to invoke:
 - Onboarding to inherited/acquired codebases
 
 At startup, read:
-- the [compact MCP list](../reference/tools-guide.md) (tier 1: tool selection)
-- the [code search guide](../reference/category/code-search.md) (tier 2: finding patterns)
-- the [handoff guidelines](../reference/handoff-guide.md) (delegation rules)
+- the [compact MCP list](../../protocols/context/static/tools-guide.md) (tier 1: tool selection)
+- the [handoff guidelines](../../protocols/context/static/handoff-guide.md) (delegation rules)
 
 Approach:
 1. Map high-level structure: layers, modules, boundaries, data flows
@@ -42,5 +41,4 @@ Constraints and handoffs:
 - Distinguish must-fix (security, correctness, blockers) from should-improve
 - Use clink to delegate specialized deep dives (Semgrep for patterns, performance analysis)
 - AskUserQuestion for business constraints, roadmap priorities, team capacity
-- Read tier 3 deep dives when specialized analysis needed