PDBtools

Simple scripts to make your life better in protein research

PDB data download

Download.py

PDB structural benchmark

benchmark.py Benchmark two .pdb files using functions provided by ZhangLab https://zhanggroup.org/

Protein dataset

Building protein data using pickle module in a customized structure

Antibody annotation

Chain annotation including VH-VL variable(V), heavy(H) and light(L) chain domains annotation Complementarity Determining Region (CDR) annotation using AbRSA http://cao.labshare.cn/AbRSA/