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Run the Benoit R code with their data and our data and do a replication study

validation

Status: Open.

#79 In SATAY-LL/Transposonmapper;

· leilaicruz opened on Oct 25, 2022

Discard the maximum read from the postprocessing script Transposonmapper

enhancementNew feature or requestNew feature or request

Status: Open.

#76 In SATAY-LL/Transposonmapper;

· leilaicruz opened on Mar 1, 2022

Add preprocessing steps to the JupyterBook documentation and Readme file

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Open.

#74 In SATAY-LL/Transposonmapper;

· leilaicruz opened on Feb 22, 2022

Include DpnII and NlaIII digestion site trimming

enhancementNew feature or requestNew feature or request

Status: Open.

#73 In SATAY-LL/Transposonmapper;

· EKingma opened on Feb 22, 2022

Update the docker image with updates on the analysis packages

update

Status: Open.

#72 In SATAY-LL/Transposonmapper;

· leilaicruz opened on Feb 17, 2022

Write (draft) software maintenance document

Status: Open.

#61 In SATAY-LL/Transposonmapper;

· mwakok opened on Sep 29, 2021

Workshop troubleshooting

Status: Open.

#60 In SATAY-LL/Transposonmapper;

· leilaicruz opened on Sep 23, 2021

Develop repoducible analysis pipeline

Status: Open.

#20 In SATAY-LL/Transposonmapper;

· mwakok opened on May 18, 2021

Image upload

Status: Open.

#22 In SATAY-LL/Transposonmapper;

· mwakok opened on May 4, 2021