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@znichollscr znichollscr commented Dec 13, 2024

Description

Closes #140

Checklist

Please confirm that this pull request has done the following:

  • Documentation added (where applicable)
  • Changelog item added to changelog/
  • Waited until data is published on ESGF
  • Added published ESGF info

@znichollscr
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@jfkok can you confirm you're happy with this please?

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x-ref PCMDI/mip-cmor-tables#84

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No changes to the database between 'main' branch and 3a19f74

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No changes to the database between 'main' branch and 634f7dc

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No changes to the database between 'main' branch and bfa70e6

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Changes to the database between commit 170a42c and the 'main' branch

Summary table
count
source_id operation
UCLA-1-0-1 create 1
UCLA-1-0-1-constant create 1
UCLA-1-0-1-decreasing create 1
UCLA-1-0-1-increasing create 1
Overview
operation source_id,tracking_id
0 create UCLA-1-0-1-decreasing,None
1 create UCLA-1-0-1-constant,None
2 create UCLA-1-0-1-increasing,None
3 create UCLA-1-0-1,None
Overview, split by source ID
Source ID: UCLA-1-0-1
operation source_id,tracking_id source_id
3 create UCLA-1-0-1,None UCLA-1-0-1
Source ID: UCLA-1-0-1-constant
operation source_id,tracking_id source_id
1 create UCLA-1-0-1-constant,None UCLA-1-0-1-constant
Source ID: UCLA-1-0-1-decreasing
operation source_id,tracking_id source_id
0 create UCLA-1-0-1-decreasing,None UCLA-1-0-1-decreasing
Source ID: UCLA-1-0-1-increasing
operation source_id,tracking_id source_id
2 create UCLA-1-0-1-increasing,None UCLA-1-0-1-increasing
Detailed changes, split by source ID
Source ID: UCLA-1-0-1
Created entry for tracking ID: None Entry:
{
    "Conventions": null,
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected]",
    "creation_date": null,
    "data_node": null,
    "dataset_category": null,
    "datetime_end": null,
    "datetime_start": null,
    "doi": null,
    "esgf_dataset_master_id": null,
    "filepath": null,
    "frequency": null,
    "further_info_url": "http://www.tbd.invalid",
    "grid": null,
    "grid_label": null,
    "institution": null,
    "institution_id": "UCLA",
    "latest": null,
    "license": null,
    "license_id": "CC BY 4.0",
    "mip_era": "CMIP6Plus",
    "nominal_resolution": null,
    "product": null,
    "publication_status": "registered",
    "realm": null,
    "references": null,
    "region": null,
    "replica": null,
    "sha256": null,
    "source": null,
    "source_id": "UCLA-1-0-1",
    "source_version": "1.0.1",
    "target_mip": null,
    "time_range": null,
    "timestamp": null,
    "tracking_id": null,
    "validated_input4mips": null,
    "variable_id": null,
    "version": null,
    "xlink": null
}
Source ID: UCLA-1-0-1-constant
Created entry for tracking ID: None Entry:
{
    "Conventions": null,
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected]",
    "creation_date": null,
    "data_node": null,
    "dataset_category": null,
    "datetime_end": null,
    "datetime_start": null,
    "doi": null,
    "esgf_dataset_master_id": null,
    "filepath": null,
    "frequency": null,
    "further_info_url": "http://www.tbd.invalid",
    "grid": null,
    "grid_label": null,
    "institution": null,
    "institution_id": "UCLA",
    "latest": null,
    "license": null,
    "license_id": "CC BY 4.0",
    "mip_era": "CMIP6Plus",
    "nominal_resolution": null,
    "product": null,
    "publication_status": "registered",
    "realm": null,
    "references": null,
    "region": null,
    "replica": null,
    "sha256": null,
    "source": null,
    "source_id": "UCLA-1-0-1-constant",
    "source_version": "1.0.1",
    "target_mip": null,
    "time_range": null,
    "timestamp": null,
    "tracking_id": null,
    "validated_input4mips": null,
    "variable_id": null,
    "version": null,
    "xlink": null
}
Source ID: UCLA-1-0-1-decreasing
Created entry for tracking ID: None Entry:
{
    "Conventions": null,
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected]",
    "creation_date": null,
    "data_node": null,
    "dataset_category": null,
    "datetime_end": null,
    "datetime_start": null,
    "doi": null,
    "esgf_dataset_master_id": null,
    "filepath": null,
    "frequency": null,
    "further_info_url": "http://www.tbd.invalid",
    "grid": null,
    "grid_label": null,
    "institution": null,
    "institution_id": "UCLA",
    "latest": null,
    "license": null,
    "license_id": "CC BY 4.0",
    "mip_era": "CMIP6Plus",
    "nominal_resolution": null,
    "product": null,
    "publication_status": "registered",
    "realm": null,
    "references": null,
    "region": null,
    "replica": null,
    "sha256": null,
    "source": null,
    "source_id": "UCLA-1-0-1-decreasing",
    "source_version": "1.0.1",
    "target_mip": null,
    "time_range": null,
    "timestamp": null,
    "tracking_id": null,
    "validated_input4mips": null,
    "variable_id": null,
    "version": null,
    "xlink": null
}
Source ID: UCLA-1-0-1-increasing
Created entry for tracking ID: None Entry:
{
    "Conventions": null,
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected]",
    "creation_date": null,
    "data_node": null,
    "dataset_category": null,
    "datetime_end": null,
    "datetime_start": null,
    "doi": null,
    "esgf_dataset_master_id": null,
    "filepath": null,
    "frequency": null,
    "further_info_url": "http://www.tbd.invalid",
    "grid": null,
    "grid_label": null,
    "institution": null,
    "institution_id": "UCLA",
    "latest": null,
    "license": null,
    "license_id": "CC BY 4.0",
    "mip_era": "CMIP6Plus",
    "nominal_resolution": null,
    "product": null,
    "publication_status": "registered",
    "realm": null,
    "references": null,
    "region": null,
    "replica": null,
    "sha256": null,
    "source": null,
    "source_id": "UCLA-1-0-1-increasing",
    "source_version": "1.0.1",
    "target_mip": null,
    "time_range": null,
    "timestamp": null,
    "tracking_id": null,
    "validated_input4mips": null,
    "variable_id": null,
    "version": null,
    "xlink": null
}

@znichollscr znichollscr requested a review from durack1 December 13, 2024 10:21
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@znichollscr this looks good to me, I do wonder about whether having a separate source_id for each "scenario" is a good idea, but I think this is the cleanest and easiest way to get stuff done quickly.. What target_mip do we want to identify here - AerChemMIP2? That is what we have identified at https://wcrp-cmip.org/mips/aerchemmip2/ and https://wcrp-cmip.org/mips/#registered_mips

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znichollscr commented Dec 19, 2024

@znichollscr this looks good to me, I do wonder about whether having a separate source_id for each "scenario" is a good idea, but I think this is the cleanest and easiest way to get stuff done quickly

Yes and the way it was done in CMIP6. As you say, other solutions aren't obvious and we should approach them more slowly (x-ref #64).

What target_mip do we want to identify here - AerChemMIP2?

Ah yes, probably a good question for @jfkok. Is AerChemMIP2 the right target MIP?

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jfkok commented Dec 19, 2024

Yes, AerChemMIP2 is the correct target MIP - thanks for checking. And the UCLA source ID and institution ID look good to me, thanks.

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Perfect. I think if you follow the instructions in this comment (#140 (comment)), then we'll be good to go

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@durack1 we can either merge this now, then update once we have data. Or we can just let this sit until we have data. I don't mind either way, but it might be easier for you to see how this all fits together if we wait (because, that way, there won't be all these null values for target_mip and other things that often cause confusion)

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jfkok commented Dec 19, 2024 via email

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durack1 commented Dec 19, 2024

Early 2025 works well for me, I don't believe this is holding anything up, now, so circling back and cleaning up some loose ends will be useful - January 2025, @jfkok ping this thread when you're back online - have a great xmas break!

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jfkok commented Dec 19, 2024 via email

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Changes to the database between commit 6849c8b and the 'main' branch

Summary table
count
source_id operation
UCLA-1-0-1 create 1
UCLA-1-0-1-constant create 1
UCLA-1-0-1-decreasing create 1
UCLA-1-0-1-increasing create 1
Overview
operation source_id,tracking_id
0 create UCLA-1-0-1-increasing,None
1 create UCLA-1-0-1-constant,None
2 create UCLA-1-0-1-decreasing,None
3 create UCLA-1-0-1,None
Overview, split by source ID
Source ID: UCLA-1-0-1
operation source_id,tracking_id source_id
3 create UCLA-1-0-1,None UCLA-1-0-1
Source ID: UCLA-1-0-1-constant
operation source_id,tracking_id source_id
1 create UCLA-1-0-1-constant,None UCLA-1-0-1-constant
Source ID: UCLA-1-0-1-decreasing
operation source_id,tracking_id source_id
2 create UCLA-1-0-1-decreasing,None UCLA-1-0-1-decreasing
Source ID: UCLA-1-0-1-increasing
operation source_id,tracking_id source_id
0 create UCLA-1-0-1-increasing,None UCLA-1-0-1-increasing
Detailed changes, split by source ID
Source ID: UCLA-1-0-1
Created entry for tracking ID: None Entry:
{
    "Conventions": null,
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected]",
    "creation_date": null,
    "data_node": null,
    "dataset_category": null,
    "datetime_end": null,
    "datetime_start": null,
    "doi": null,
    "esgf_dataset_master_id": null,
    "filepath": null,
    "frequency": null,
    "further_info_url": "http://www.tbd.invalid",
    "grid": null,
    "grid_label": null,
    "institution": null,
    "institution_id": "UCLA",
    "latest": null,
    "license": null,
    "license_id": "CC BY 4.0",
    "mip_era": "CMIP6Plus",
    "nominal_resolution": null,
    "product": null,
    "publication_status": "registered",
    "realm": null,
    "references": null,
    "region": null,
    "replica": null,
    "sha256": null,
    "source": null,
    "source_id": "UCLA-1-0-1",
    "source_version": "1.0.1",
    "target_mip": null,
    "time_range": null,
    "timestamp": null,
    "tracking_id": null,
    "validated_input4mips": null,
    "variable_id": null,
    "version": null,
    "xlink": null
}
Source ID: UCLA-1-0-1-constant
Created entry for tracking ID: None Entry:
{
    "Conventions": null,
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected]",
    "creation_date": null,
    "data_node": null,
    "dataset_category": null,
    "datetime_end": null,
    "datetime_start": null,
    "doi": null,
    "esgf_dataset_master_id": null,
    "filepath": null,
    "frequency": null,
    "further_info_url": "http://www.tbd.invalid",
    "grid": null,
    "grid_label": null,
    "institution": null,
    "institution_id": "UCLA",
    "latest": null,
    "license": null,
    "license_id": "CC BY 4.0",
    "mip_era": "CMIP6Plus",
    "nominal_resolution": null,
    "product": null,
    "publication_status": "registered",
    "realm": null,
    "references": null,
    "region": null,
    "replica": null,
    "sha256": null,
    "source": null,
    "source_id": "UCLA-1-0-1-constant",
    "source_version": "1.0.1",
    "target_mip": null,
    "time_range": null,
    "timestamp": null,
    "tracking_id": null,
    "validated_input4mips": null,
    "variable_id": null,
    "version": null,
    "xlink": null
}
Source ID: UCLA-1-0-1-decreasing
Created entry for tracking ID: None Entry:
{
    "Conventions": null,
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected]",
    "creation_date": null,
    "data_node": null,
    "dataset_category": null,
    "datetime_end": null,
    "datetime_start": null,
    "doi": null,
    "esgf_dataset_master_id": null,
    "filepath": null,
    "frequency": null,
    "further_info_url": "http://www.tbd.invalid",
    "grid": null,
    "grid_label": null,
    "institution": null,
    "institution_id": "UCLA",
    "latest": null,
    "license": null,
    "license_id": "CC BY 4.0",
    "mip_era": "CMIP6Plus",
    "nominal_resolution": null,
    "product": null,
    "publication_status": "registered",
    "realm": null,
    "references": null,
    "region": null,
    "replica": null,
    "sha256": null,
    "source": null,
    "source_id": "UCLA-1-0-1-decreasing",
    "source_version": "1.0.1",
    "target_mip": null,
    "time_range": null,
    "timestamp": null,
    "tracking_id": null,
    "validated_input4mips": null,
    "variable_id": null,
    "version": null,
    "xlink": null
}
Source ID: UCLA-1-0-1-increasing
Created entry for tracking ID: None Entry:
{
    "Conventions": null,
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected]",
    "creation_date": null,
    "data_node": null,
    "dataset_category": null,
    "datetime_end": null,
    "datetime_start": null,
    "doi": null,
    "esgf_dataset_master_id": null,
    "filepath": null,
    "frequency": null,
    "further_info_url": "http://www.tbd.invalid",
    "grid": null,
    "grid_label": null,
    "institution": null,
    "institution_id": "UCLA",
    "latest": null,
    "license": null,
    "license_id": "CC BY 4.0",
    "mip_era": "CMIP6Plus",
    "nominal_resolution": null,
    "product": null,
    "publication_status": "registered",
    "realm": null,
    "references": null,
    "region": null,
    "replica": null,
    "sha256": null,
    "source": null,
    "source_id": "UCLA-1-0-1-increasing",
    "source_version": "1.0.1",
    "target_mip": null,
    "time_range": null,
    "timestamp": null,
    "tracking_id": null,
    "validated_input4mips": null,
    "variable_id": null,
    "version": null,
    "xlink": null
}

@znichollscr znichollscr marked this pull request as draft December 28, 2024 11:41
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durack1 commented Feb 14, 2025

@znichollscr this is ready to roll - needs a new ESGF poll, HTML regeneration and we're good to go

@znichollscr znichollscr marked this pull request as ready for review February 14, 2025 08:45
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@znichollscr this is ready to roll - needs a new ESGF poll, HTML regeneration and we're good to go

Done: hit merge if you're happy

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Changes to the database between commit 29c26b0 and the 'main' branch

Summary table
count
source_id operation
UCLA-1-0-1 create 2
UCLA-1-0-1-constant create 2
UCLA-1-0-1-decreasing create 2
UCLA-1-0-1-increasing create 2
Overview
operation source_id,tracking_id
0 create UCLA-1-0-1-decreasing,hdl:21.14100/3723396f-c79f-442c-a62d-1c5ab6dc055a
1 create UCLA-1-0-1-decreasing,hdl:21.14100/95a26ffb-eb7d-450f-8e0e-69d0947b02f8
2 create UCLA-1-0-1-increasing,hdl:21.14100/3910e83e-3c99-45be-9587-468924e23df0
3 create UCLA-1-0-1-constant,hdl:21.14100/7cfae708-cfd1-4af6-9a1d-45142c1a6ea0
4 create UCLA-1-0-1,hdl:21.14100/7ebb2dfc-2a87-443a-a6a1-546b1241c5d5
5 create UCLA-1-0-1,hdl:21.14100/7af74449-4871-4b67-808d-5f696f72f3f7
6 create UCLA-1-0-1-constant,hdl:21.14100/5c62a539-c452-4c28-86e1-30bb45c75ea6
7 create UCLA-1-0-1-increasing,hdl:21.14100/f207098d-2681-4699-a5c2-d60eb6c9e3fb
Overview, split by source ID
Source ID: UCLA-1-0-1
operation source_id,tracking_id source_id
4 create UCLA-1-0-1,hdl:21.14100/7ebb2dfc-2a87-443a-a6a1-546b1241c5d5 UCLA-1-0-1
5 create UCLA-1-0-1,hdl:21.14100/7af74449-4871-4b67-808d-5f696f72f3f7 UCLA-1-0-1
Source ID: UCLA-1-0-1-constant
operation source_id,tracking_id source_id
3 create UCLA-1-0-1-constant,hdl:21.14100/7cfae708-cfd1-4af6-9a1d-45142c1a6ea0 UCLA-1-0-1-constant
6 create UCLA-1-0-1-constant,hdl:21.14100/5c62a539-c452-4c28-86e1-30bb45c75ea6 UCLA-1-0-1-constant
Source ID: UCLA-1-0-1-decreasing
operation source_id,tracking_id source_id
0 create UCLA-1-0-1-decreasing,hdl:21.14100/3723396f-c79f-442c-a62d-1c5ab6dc055a UCLA-1-0-1-decreasing
1 create UCLA-1-0-1-decreasing,hdl:21.14100/95a26ffb-eb7d-450f-8e0e-69d0947b02f8 UCLA-1-0-1-decreasing
Source ID: UCLA-1-0-1-increasing
operation source_id,tracking_id source_id
2 create UCLA-1-0-1-increasing,hdl:21.14100/3910e83e-3c99-45be-9587-468924e23df0 UCLA-1-0-1-increasing
7 create UCLA-1-0-1-increasing,hdl:21.14100/f207098d-2681-4699-a5c2-d60eb6c9e3fb UCLA-1-0-1-increasing
Detailed changes, split by source ID
Source ID: UCLA-1-0-1
Created entry for tracking ID: hdl:21.14100/7af74449-4871-4b67-808d-5f696f72f3f7 Entry:
{
    "Conventions": "CF-1.7",
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected];[email protected]",
    "creation_date": "2025-02-12T16:29:32Z",
    "data_node": "esgf-data2.llnl.gov",
    "dataset_category": "emissions",
    "datetime_end": "2000-07-02T00:00:00Z",
    "datetime_start": "1850-07-02T00:00:00Z",
    "doi": null,
    "esgf_dataset_master_id": "input4MIPs.CMIP6Plus.AerChemMIP2.UCLA.UCLA-1-0-1.atmos.yr.dustscalefactor.gm.v20250212",
    "filepath": "/p/user_pub/work/input4MIPs/CMIP6Plus/AerChemMIP2/UCLA/UCLA-1-0-1/atmos/yr/dustscalefactor/gm/v20250212/dustscalefactor_input4MIPs_emissions_AerChemMIP2_UCLA-1-0-1_gm_1850-2000.nc",
    "frequency": "yr",
    "further_info_url": "https://dustcomm.atmos.ucla.edu",
    "grid": null,
    "grid_label": "gm",
    "institution": "University of California-Los Angeles, Los Angeles, CA 90095, USA",
    "institution_id": "UCLA",
    "latest": true,
    "license": "The input4MIPs data linked to this entry is licensed under a Creative Commons Attribution 4.0 International (https://creativecommons.org/licenses/by/4.0/). Consult https://pcmdi.llnl.gov/CMIP6/TermsOfUse for terms of use governing CMIP6Plus output, including citation requirements and proper acknowledgment. The data producers and data providers make no warranty, either express or implied, including, but not limited to, warranties of merchantability and fitness for a particular purpose. All liabilities arising from the supply of the information (including any liability arising in negligence) are excluded to the fullest extent permitted by law.",
    "license_id": "CC BY 4.0",
    "mip_era": "CMIP6Plus",
    "nominal_resolution": "10000 km",
    "product": null,
    "publication_status": "published",
    "realm": "atmos",
    "references": null,
    "region": null,
    "replica": false,
    "sha256": "e40b8df8e02c2dd5bf2be42ed4814ad0276cb49c36f3ec0fe91de08e3eb2dcf4",
    "source": "UCLA 1.0.1: DustCOMM historical dust emissions based on Kok et al. (2023) and Leung et al. (2024b)",
    "source_id": "UCLA-1-0-1",
    "source_version": "1.0.1",
    "target_mip": "AerChemMIP2",
    "time_range": "1850-2000",
    "timestamp": "2025-02-13T17:40:54.807Z",
    "tracking_id": "hdl:21.14100/7af74449-4871-4b67-808d-5f696f72f3f7",
    "validated_input4mips": null,
    "variable_id": "dustscalefactor",
    "version": "20250212",
    "xlink": null
}
Created entry for tracking ID: hdl:21.14100/7ebb2dfc-2a87-443a-a6a1-546b1241c5d5 Entry:
{
    "Conventions": "CF-1.7",
    "activity_id": "input4MIPs",
    "comment": null,
    "comment_post_publication": null,
    "contact": "[email protected];[email protected]",
    "creation_date": "2025-02-12T16:29:33Z",
    "data_node": "esgf-data2.llnl.gov",
    "dataset_category": "emissions",
    "datetime_end": "2000-07-02T00:00:00Z",
    "datetime_start": "1850-07-02T00:00:00Z",
    "doi": null,
    "esgf_dataset_master_id": "input4MIPs.CMIP6Plus.AerChemMIP2.UCLA.UCLA-1-0-1.atmos.yr.dustscalefactor.gn.v20250212",
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}

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@znichollscr all looks good to me - go go merge!

@durack1 durack1 merged commit e72809f into main Feb 14, 2025
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@durack1 durack1 deleted the ucla-1-0-1 branch February 14, 2025 19:14
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durack1 commented Feb 14, 2025

I did have a think about how we are capturing these non-CMIP datasets - doesn't make sense to me that we'd list this with the core DECK/historical datasets in the HTML - was that your thoughts too? I see that the delivery-summary HTML file was not updated

@znicholls
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Well they're in the other HTML views, e.g. https://input4mips-controlled-vocabularies-cvs.readthedocs.io/en/stable/database-views/input4MIPs_datasets_CMIP6Plus.html

But yes not in delivery summary because they're not relevant for that

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jfkok commented Feb 22, 2025

@znichollscr and @durack1: A user found a typo in the description of one of the dust emission files. Because the typo can cause confusion (it says "decreasing" for the dust emission file for the scenario with increasing future dust emissions), I went ahead and fixed the typo and uploaded the corrected files using the python code you provided, using UCLA-1-0-1-upload-5. Would it be possible to update the files accordingly? Sorry for the hassle and let me know if you need anything else from me for this!

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Add dust emissions

5 participants