Jacob/max sub update#962

Merged

jacobpennington merged 3 commits intomainfrom

jacob/max_sub_update

Jul 18, 2025

Commits on Jun 22, 2025

Changed max_sub to fixed size, defaults to 25000
Jacob Pennington
committed

Commits on Jul 17, 2025

Updated parameter references for new clustering default
Jacob Pennington
committed
Made pipeline test compatible with new default settings
Jacob Pennington
committed