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18 changes: 17 additions & 1 deletion src/opsinputs/GnssroStationIDMetOffice.cc
Original file line number Diff line number Diff line change
Expand Up @@ -37,6 +37,7 @@ static ObsFunctionMaker<GnssroStationIDMetOffice>
GnssroStationIDMetOffice::GnssroStationIDMetOffice(const eckit::LocalConfiguration & conf)
: invars_() {
invars_ += Variable("MetaData/satelliteIdentifier");
invars_ += Variable("MetaData/qualityFlags");
}

// -----------------------------------------------------------------------------
Expand All @@ -55,6 +56,20 @@ void GnssroStationIDMetOffice::compute(const ObsFilterData & in,
std::vector<int> satid;
in.get(Variable("MetaData/satelliteIdentifier"), satid);

const int missing = util::missingValue<int>();
std::vector<int> qualityFlags;
in.get(Variable("MetaData/qualityFlags"), qualityFlags);
std::vector<int> isRising(nlocs, 2); // setting = 0, rising = 1, unknown = 2
for (size_t i = 0; i < nlocs; ++i) {
if (qualityFlags[i] == missing) {
isRising[i] = 2;
} else if ((qualityFlags[i] & (1 << 13)) != 0) {
isRising[i] = 1;
} else {
isRising[i] = 0;
}
}

// Get the record number of each profile
std::vector<size_t> recordNumbers = out.space().recidx_all_recnums();
oops::Log::debug() << "Unique record numbers" << std::endl;
Expand All @@ -69,7 +84,8 @@ void GnssroStationIDMetOffice::compute(const ObsFilterData & in,
for (size_t jobs : obsNumbers) {
out[0][jobs] = stringFormat(satid[jobs], 4) +
stringFormat(iProfile, 5) +
stringFormat(jobs, 7);
stringFormat(jobs, 6) +
stringFormat(isRising[jobs], 1);
}
}
}
Expand Down
3 changes: 2 additions & 1 deletion test/generate_unittest_netcdfs.py
Original file line number Diff line number Diff line change
Expand Up @@ -852,7 +852,8 @@ def copy_var_to_var(Group, invarname, outvarname, filename):
'ObsValue/bendingAngle',
'ObsError/bendingAngle'],
[],
['MetaData/satelliteIdentifier'],
['MetaData/satelliteIdentifier',
'MetaData/qualityFlags'],
'testinput/varobs_globalnamelist_gnssro.nc4')

# Sonde
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