Feature/settings#112

Merged

pierrepo merged 12 commits intomainfrom

feature/settings

Jan 29, 2026

Commits on Nov 20, 2025

Commits on Nov 21, 2025

Commits on Nov 24, 2025

proper implementation and use of settings
benoistlaurent
committed

Commits on Nov 25, 2025

Commits on Nov 27, 2025

--no-atom-ids stored into the Settings class
benoistlaurent
committed

Commits on Dec 2, 2025

bugfix: fixes changes in API that were unaccounted for in tests
benoistlaurent
committed
bugfix: fixes default cutoff distance for coarse-grain detection to preserve regression test results
benoistlaurent
committed

Commits on Jan 29, 2026

logging.py: remove debug statement
benoistlaurent
committed