Reference genome:

1. Homo_sapiens.GRCh38.81.gtf
2. Homo_sapiens.GRCh38.dna.primary_assembly.fa

Package versions:

1. STAR: STAR/2.7.11a-GCC-12.3.0
2. Trimmomatic: Trimmomatic/0.40-Java-17
3. FastQC: FastQC/0.12.1-Java-11
4. BamTools: BamTools/2.5.2-GCC-12.3.0
5. SAMTools: SAMtools/1.18-GCC-12.3.0
6. multiqc: multiqc: multiqc/1.28