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16S rRNA

Status: Open.

#60 In KIT-IBG-5/mdmcleaner;

· lfdelzam opened on Jun 27, 2025

blastp error incorrect versions

Status: Open.

#59 In KIT-IBG-5/mdmcleaner;

· swelbo opened on Apr 2, 2025

provide a new pre-built database for gtdb v220

Status: Open.

#57 In KIT-IBG-5/mdmcleaner;

· jianshu93 opened on Oct 22, 2024

An error occured during blastp run with query '-'

Status: Open.

#55 In KIT-IBG-5/mdmcleaner;

· rzhan186 opened on Jun 8, 2023

Error when checking dependencies in mdmcleaner makedb

Status: Open.

#54 In KIT-IBG-5/mdmcleaner;

· danpal96 opened on Apr 12, 2023

Error in database downloading

Status: Open.

#52 In KIT-IBG-5/mdmcleaner;

· uzun-masha opened on Mar 13, 2023

KeyError: 'Bacteria'

Status: Open.

#38 In KIT-IBG-5/mdmcleaner;

· chassenr opened on Sep 7, 2022

highly contaminated bins should get a warning not to use filtered data even after cleaning

documentationImprovements or additions to documentationImprovements or additions to documentation

enhancementNew feature or requestNew feature or request

Status: Open.

#29 In KIT-IBG-5/mdmcleaner;

· jvollme opened on May 27, 2022

·  

Improvements A

t-rna based completeness estimations should not be returned for eukaryotic bins

bugSomething isn't workingSomething isn't working

Status: Open.

#28 In KIT-IBG-5/mdmcleaner;

· jvollme opened on May 27, 2022

add a positive list for referencedb-ambiguities to speed things up

enhancementNew feature or requestNew feature or request

Status: Open.

#24 In KIT-IBG-5/mdmcleaner;

· jvollme opened on Mar 18, 2022

·  

improvementsB

dereplicate proteins on genus level to reduce database size

Status: Open.

#21 In KIT-IBG-5/mdmcleaner;

· jvollme opened on Feb 21, 2022

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improvementsB

incorporate minHash

Status: Open.

#20 In KIT-IBG-5/mdmcleaner;

· jvollme opened on Feb 21, 2022

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improvementsB