feature: Aggregate and plot statistics #50
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This reverts commit 8854b13. Yet again files haven't been ignored and changes need reverting >:(
Closes #48 Calculates... - Number of pores per layer - Area of pores on each layer - Centroid of each pore on each layer - Maximum feret distance of each pore on each layer Plots the layer v number of pores (or optionally log of number of layers) Includes tests for each of these. Adds attributes for these to the `AFMSlicer` class and populates these on instantiation - `AFMSlicer.sliced_region_properties` - `AFMSlicer.pores_per_layer` - `AFMSlicer.fig_objects_per_layer` - `AFMSlicer.fig_log_objects_per_layer`
Closes #48 - Adds `plotting.plot_area_by_layer()` to plot the total area (or log of total area) of objects within a layer. - Adds attributes to the `AFMSlicer` class to store these in. - Adds steps to `__post_init__` to generate these plots conditional on the configuration. - Sets `slicing.area: true` in `default_config.yaml` so that statistics of area and plots are always generated.
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Partially address #48 by counting the number of objects per-layer and plotting them.