3D medical imaging reconstruction software

Medical image processing in Python

A Numerical Magnetic Resonance Imaging (MRI) Simulation Platform

medigan - A Python Library of Pretrained Generative Models for Medical Image Synthesis

Quantitative MRI Made Easy with qMRLab: MRI software for data Simulation, analysis and visualization

A PyTorch-powered differentiable image reconstruction/optimization toolbox

Resources for learning the principles of magnetic resonance imaging (MRI)

Unified super-resolution and denoising of medical images in PyTorch

Segment Source Distribution

dMRIPrep is a robust and easy-to-use pipeline for preprocessing of diverse dMRI data. The transparent workflow dispenses of manual intervention, thereby ensuring the reproducibility of the results.

MuscleMap: An Open-Source, Community-Supported Consortium for Whole-Body Quantitative MRI of Muscle

Official implementation of the Reconstruct Anything Model (RAM)

An Interactive Approach to Understanding Deep Learning with Keras

MATLAB code for Multidimensional Diffusion MRI

A Library of TensorFlow Operators for Computational MRI

Awesome Magnetic Resonance Imaging (MRI)

Susceptibility Distortion Correction (SDC) workflows for EPI MR schemes

Official implementation of the Fourier-constrained diffusion bridges (FDB) model for MRI reconstruction

Official PyTorch implementaiton of the paper "3D Instance Segmentation Framework for Cerebral Microbleeds using 3D Multi-Resolution R-CNN."

REACT: Receptor-Enriched Analysis of functional Connectivity by Targets