The following DB has x9 folders in its ./spatial subfolder, each with their own distinct image_ & scalefactors_ files, and cannot be parsed into the visium reader.
Note: This is an aggregate DB, and its subsections already exist in our scripts/database.
- h3jfi__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__AggregateofTissueCores db on 10x website
They are the following:
- jezks__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__InputsLibrary
- vrwlc__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__AllTissueCores
- uk0rv__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__BrainReplicate1
- 0ufac__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__BrainReplicate2
- bw2x9__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__BrainReplicate3
- f0fww__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__BrainReplicate4
- th4zp__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__LungReplicate1
- 5nwfc__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__LungReplicate2
- vt6x9__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__LungReplicate3
- 4b368__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__LungReplicate4
- 9btjk__10X__Visium__Mouse__lung_brain__20230221__v2.0.1__LungReplicate5
Refer to #11
The following DB has x9 folders in its ./spatial subfolder, each with their own distinct image_ & scalefactors_ files, and cannot be parsed into the visium reader.
Note: This is an aggregate DB, and its subsections already exist in our scripts/database.
They are the following:
Refer to #11