improvement ideas #2
Description
- Assembly quality assessment:
https://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-021-04056-0 - polishing avec pilon ?
- canu report should use a prefix. Maybe just a wrapper canu change is required ?
- in order to speed up the multiqc, we can specifically add the modules with -m
- sort contig by length in the HTML reports