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Commit f75f8f6

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Philipp Rentzsch
committed
fixed typo, fixes #14
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src/scripts/extract_scored.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -53,7 +53,7 @@
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lref,allele = fields[-2],fields[-1]
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for regionHit in regionTabix.fetch(chrom, pos-1, pos):
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vfields = regionHit.rstrip().split('\t')
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if (vfields[fref] == lref) and (vfields[falt] == allele) and (vfields[fpos] == pos)):
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if (vfields[fref] == lref) and (vfields[falt] == allele) and (vfields[fpos] == pos):
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found_out.write(regionHit+"\n")
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found = True
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break

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