Empty bed file after running wellington_footprints.py

[hiroyukikato911]

Hi,

This might be same type of question as #29 or #37.
I have ATAC seq data and whenever I run wellington on my data, I get "waiting on last 80 threads." as the last output.
The process seems to finish immediately, yeilding empty WellingtonFootprints.FDR.0.01.bed file.
I tried different FDR cutoff, but not seems working.

I installed
pip install pyDNase=0.3.0

I'm running
python 2.7

Any solution for this?
Thank you so much in advance.

[jpiper]

I'm hoping #39 will have fixed this. I am working on a new release...

[DimitrisGrig]

problem insists