Merge branch 'main' into eu-additions

Author: bgruening

.github/workflows/requirements.txt

@@ -1,3 +1,4 @@
 total-perspective-vortex
 pyyaml
 galaxy-app
+pydantic<2.12

tools.yml

@@ -1250,6 +1250,13 @@ tools:
     mem: 24
   toolshed.g2.bx.psu.edu/repos/iuc/cat_bins/cat_bins/.*:
     mem: 24
+    rules:
+    - id: tpvdb_cat_bins_medium_input_rule
+      if: input_size >= 0.03
+      mem: 48
+    - id: tpvdb_cat_bins_large_input_rule
+      if: input_size >= 0.06
+      mem: 72
   toolshed.g2.bx.psu.edu/repos/iuc/cat_contigs/cat_contigs/.*:
     mem: 24
   toolshed.g2.bx.psu.edu/repos/iuc/checkm2/checkm2/.*: