Parsing bug in EM structures

[josemduarte]

Issue by kumar-physics
Friday Jun 20, 2014 at 08:17 GMT
Originally opened as https://github.com/eppic-team/eppic-cli/issues/8

---

The resolution value for EM structures are not properly parsed . I found 472 EM structures in our present database has no resolution value. I randomly checked few from the list, and all those ones I checked have resolution value in the PDB website. I think this could be a parsing bug.

example 1vwx has 3.4A resolution, but EPPIC says resolution is not defined for this structure.

but 4d2q the parsing works fine.

This list could be obtained with this mysql command

select pdbName from PdbScore where expMethod="ELECTRON MICROSCOPY" and resolution<0;