run lfs in original dir

Author: RubenHalman

.github/workflows/scanAndTest.yml

@@ -154,6 +154,18 @@ jobs:
             - name: 'Authenticate to Integration Org'
               run: sfdx auth:sfdxurl:store -f ./SFDX_INTEGRATION_URL.txt -s -a integration
 
+            # Run Lightning Flow Scanner
+            - name: Run Flow Scanner
+              id: scanner
+              uses: Flow-Scanner/[email protected]
+              with:
+                outputMode: sarif      # optional (default)
+
+            - name: Upload SARIF to Code Scanning
+              uses: github/codeql-action/upload-sarif@v3
+              with:
+                sarif_file: ${{ steps.scanner.outputs.sarifPath }}
+
             # We use SFDX Git Delta to create a directory with only the metadata that has changed.
             # this allows us to deploy only those changes, as opposed to deploying the entire branch. 
             # This helps reducing deployment times
@@ -182,20 +194,6 @@ jobs:
             # If the env variable does not equal 'all', we know that there is a list of
             # tests that can be run
 
-            - name: Checkout repository
-              uses: actions/checkout@v4
-
-            - name: Run Flow Scanner
-              id: scanner
-              uses: Flow-Scanner/[email protected]
-              with:
-                outputMode: sarif      # optional (default)
-
-            - name: Upload SARIF to Code Scanning
-              uses: github/codeql-action/upload-sarif@v3
-              with:
-                sarif_file: ${{ steps.scanner.outputs.sarifPath }}
-
             - name: 'Check-only deploy delta changes - run specified tests'
               if: ${{ env.APEX_TESTS != 'all' }}
               run: |