Update 11_Run_OPERA_Original_Proportion.ipynb

xueweic · xueweic · commit fe86baf19d53 · 2025-04-29T02:17:52.000-04:00
diff --git a/Simulation_Studies/11_Run_OPERA_Original_Proportion.ipynb b/Simulation_Studies/11_Run_OPERA_Original_Proportion.ipynb
@@ -96,7 +96,7 @@
     "\n",
     "saveRDS(\n",
     "    list(partitioned_indices = partitioned_indices, config = config),\n",
-    "    \"/home/hs3393/cloud_colocalization/simulation_data/opera_original_design/index/partitioned_index_3trait.rds\"\n",
+    "    \"../simulation_data/opera_original_design/index/partitioned_index_3trait.rds\"\n",
     ")\n"
    ]
   },
@@ -174,7 +174,7 @@
     "              \n",
     "             c(1,1,1,1,1,1))\n",
     "\n",
-    "saveRDS(list(partitioned_indices = partitioned_indices, config = config), \"/home/hs3393/cloud_colocalization/simulation_data/opera_original_design/index/partitioned_index_5trait.rds\")\n"
+    "saveRDS(list(partitioned_indices = partitioned_indices, config = config), \"../simulation_data/opera_original_design/index/partitioned_index_5trait.rds\")\n"
    ]
   },
   {
@@ -1021,7 +1021,7 @@
     "kernel": "R"
    },
    "source": [
-    "## 10. Run colocboost on simulated data for comparison"
+    "## 10. Run ColocBoost on simulated data for comparison"
    ]
   },
   {

Original file line number	Diff line number	Diff line change
`@@ -96,7 +96,7 @@`
`96`	`96`	`"\n",`
`97`	`97`	`"saveRDS(\n",`
`98`	`98`	`" list(partitioned_indices = partitioned_indices, config = config),\n",`
`99`		`- " \"/home/hs3393/cloud_colocalization/simulation_data/opera_original_design/index/partitioned_index_3trait.rds\"\n",`
	`99`	`+ " \"../simulation_data/opera_original_design/index/partitioned_index_3trait.rds\"\n",`
`100`	`100`	`")\n"`
`101`	`101`	`]`
`102`	`102`	`},`
`@@ -174,7 +174,7 @@`
`174`	`174`	`" \n",`
`175`	`175`	`" c(1,1,1,1,1,1))\n",`
`176`	`176`	`"\n",`
`177`		`- "saveRDS(list(partitioned_indices = partitioned_indices, config = config), \"/home/hs3393/cloud_colocalization/simulation_data/opera_original_design/index/partitioned_index_5trait.rds\")\n"`
	`177`	`+ "saveRDS(list(partitioned_indices = partitioned_indices, config = config), \"../simulation_data/opera_original_design/index/partitioned_index_5trait.rds\")\n"`
`178`	`178`	`]`
`179`	`179`	`},`
`180`	`180`	`{`
`@@ -1021,7 +1021,7 @@`
`1021`	`1021`	`"kernel": "R"`
`1022`	`1022`	`},`
`1023`	`1023`	`"source": [`
`1024`		`- "## 10. Run colocboost on simulated data for comparison"`
	`1024`	`+ "## 10. Run ColocBoost on simulated data for comparison"`
`1025`	`1025`	`]`
`1026`	`1026`	`},`
`1027`	`1027`	`{`