'skeletonize_3d' from 'skimage.morphology'

[lubarbosa]

Hi all,
I am new in porespy, installed everything now and when I go for the example (https://porespy.org/examples/simulations/tutorials/overview_of_two_phase_flow_part2.html)

----> 2 import porespy as ps
returns:
ImportError: cannot import name 'skeletonize_3d' from 'skimage.morphology' (/home/hydros/anaconda3/lib/python3.12/site-packages/skimage/morphology/init.py)

I am using newst anaconda on linux, porespy 2.4.1, python 3.12.2, scikit-image 0.25.0.
I saw that scikit-image 0.25.0 has removed skeletonize_3d. To resolve this, I tried to downgrade scikit-image to 0.19.3, but it requires another python version.

Any help on that would be great
Luis

[jgostick]

Scikit-image has decided to change the name of this function, so it means you are using a new version of scikit-image. You can need to downgrade it to 0.23. I think that pip install "scikit-image<0.24" should work?

In the new release of porespy we have fixed this, but it's not on pypi yet.