Bioconductor #177
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| # .github/workflows/r-cmd-check.yaml | |
| # Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
| on: | |
| push: | |
| branches: [main, master] | |
| pull_request: | |
| name: R-CMD-check | |
| permissions: read-all | |
| jobs: | |
| R-CMD-check: | |
| name: ${{ matrix.config.os }} (${{ matrix.config.r }}) | |
| runs-on: ${{ matrix.config.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - { os: macos-latest, r: 'release' } | |
| - { os: windows-latest, r: 'release' } | |
| - { os: ubuntu-latest, r: 'devel', http-user-agent: 'release' } | |
| - { os: ubuntu-latest, r: 'release' } | |
| - { os: ubuntu-latest, r: 'oldrel-1' } | |
| env: | |
| GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
| R_KEEP_PKG_SOURCE: yes | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: r-lib/actions/setup-pandoc@v2 | |
| - uses: r-lib/actions/setup-r@v2 | |
| with: | |
| r-version: ${{ matrix.config.r }} | |
| http-user-agent: ${{ matrix.config.http-user-agent }} | |
| use-public-rspm: true | |
| - uses: r-lib/actions/setup-r-dependencies@v2 | |
| with: | |
| extra-packages: | | |
| any::rcmdcheck | |
| any::[email protected] | |
| needs: check | |
| - uses: r-lib/actions/check-r-package@v2 | |
| with: | |
| upload-snapshots: true | |
| # R CMD check flags: | |
| args: 'c("--as-cran", "--ignore-vignettes", "--no-manual", "--no-vignettes")' | |
| # flags for R CMD build: | |
| build_args: 'c("--no-build-vignettes", "--no-manual")' |