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1 parent ea6765f commit 6feeff6Copy full SHA for 6feeff6
.github/workflows/python-package-conda.yml
@@ -57,6 +57,8 @@ jobs:
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head phatyp/final_prediction/phatyp_prediction.tsv
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phabox2 --task cherry --contigs example_contigs.fa -o cherry -d phabox_db_v2
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head cherry/final_prediction/cherry_prediction.tsv
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+ phabox2 --task phavip --contigs example_contigs.fa -o phavip -d phabox_db_v2
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+ head phavip/final_prediction/phavip_supplementary/gene_annotation.tsv
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phabox2 --task contamination --contigs example_contigs.fa -o contamination -d phabox_db_v2
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head contamination/final_prediction/contamination_prediction.tsv
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phabox2 --task votu --contigs example_contigs.fa -o votu -d phabox_db_v2 --mode AAI
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