Hugoclsc/feature/GitHub actions (#114)

* initial actions

* Update CodeQL workflow to ignore certain paths

Ignore specific paths for CodeQL analysis on push and pull request events.

* experimenting workflows

* Add pylintrc configuration file, configure dev test code workflow

* split into multiple jobs

* Fail job on error

* pylint rc file, jobs refactores for dev workflow

* Remove upload artifacts for now, move pylintrc file to root dir

* Added upload artifacts with different files

* Rem: branch naming workflow, enviroment handles this

* Added fail-fast to false

* Run only on PR to dev

* Change file name

* Initial stage-ci workflow configuration

* Changed worflow name, added docstr-coverage tool to the workflow

* Added dependencies cache, reduces redundant installations, fixes incorrect pytest file

* Exclude F403 ruff error

* Added docstr-coverage dependency

* Fix incorrect requirements installation command

* bugfix on cli command for docstr-coverage

* Uncomment artifact upload

* Update pyproject.toml

* Added bandig config, bump requests version

* Bump requests version

* Bump requirement versions

* Add dev, stage requirements, bump all requirements

* Migrate pylint config options to pyproject.toml file

* Deleted pylintrc.dev file

* Remove unused dependencie

* uncomment upload artifacts

* Added bandit security tests

* Standardize bandit output to json

* Add environment

* Fix incorrect file extension for bandit

---------

Signed-off-by: Hugo Costa <[email protected]>

Author: HugoCLSC

.github/workflows/dev-ci.yml

@@ -60,7 +60,7 @@ jobs:
           if [ "${{ matrix.test-type }}" == "pytest" ]; then
             if [ -d "tests/" ] && [ "$(ls -A tests/)" ]; then 
               echo "Running Python unit tests"
-              pytest tests/*.py --doctest-modules --junitxml=junit/test-results.xml --cov=BlocksScreen --cov-report=xml --cov-report=html > pytest-output.txt 2>&1 
+              pytest tests/ --doctest-modules --junitxml=junit/test-results.xml --cov=BlocksScreen/ --cov-report=xml --cov-report=html > pytest-output.txt 2>&1 
             else
               echo "No tests directory no need to proceed with tests"
             fi
@@ -115,4 +115,4 @@ jobs:
         uses: actions/upload-artifact@v4
         with:
           name: bandit-output
-          path: bandit-output.txt
+          path: bandit-output.json