update workflows to use setup-miniconda@v3

Author: abearab

.github/workflows/python-package.yml

@@ -35,11 +35,10 @@ jobs:
         # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
         flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
     - name: "Install miniconda"
-      uses: conda-incubator/setup-miniconda@v2
+      uses: conda-incubator/setup-miniconda@v3
       with:
         miniconda-version: "latest"
         auto-update-conda: true
-        mamba-version: "*"
         python-version: ${{ matrix.python-version }}
         channels: conda-forge,bioconda
         environment-file: environment.yml

.github/workflows/python-publish.yml

@@ -34,11 +34,10 @@ jobs:
         # exit-zero treats all errors as warnings. The GitHub editor is 127 chars wide
         flake8 . --count --exit-zero --max-complexity=10 --max-line-length=127 --statistics
     - name: "Install miniconda"
-      uses: conda-incubator/setup-miniconda@v2
+      uses: conda-incubator/setup-miniconda@v3
       with:
         miniconda-version: "latest"
         auto-update-conda: true
-        mamba-version: "*"
         python-version: ${{ matrix.python-version }}
         channels: conda-forge,bioconda
         environment-file: environment.yml